Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.62■□□□□ 0.25
TCRBV7S3A2A0A539 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 AC092474.2-201ENST00000424288 719 ntBASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 PPT1-215ENST00000641471 2368 ntBASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.61■□□□□ 0.25
TCRBV7S3A2A0A539 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 AC109635.5-201ENST00000533593 962 ntBASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.6■□□□□ 0.25
TCRBV7S3A2A0A539 AC018845.2-201ENST00000568326 409 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms