Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 SNX33P1-201ENST00000592116 1762 ntBASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA1Q9Y5H4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 AC119751.2-201ENST00000504529 210 ntBASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 MIR4259-201ENST00000584466 101 ntBASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 AC074044.1-201ENST00000609673 707 ntBASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 WFDC1-204ENST00000613603 549 ntBASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA1Q9Y5H4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
PCDHGA1Q9Y5H4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PCDHGA1Q9Y5H4 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms