Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 AC023908.3-201ENST00000564211 3047 ntBASIC15.54■□□□□ 0.08
AP4S1Q9Y587 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
AP4S1Q9Y587 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 PGM5P2-202ENST00000637225 1043 ntBASIC15.53■□□□□ 0.08
AP4S1Q9Y587 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
AP4S1Q9Y587 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 AC007326.2-201ENST00000624224 7579 ntBASIC15.52■□□□□ 0.08
AP4S1Q9Y587 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 LIN28AP1-201ENST00000429574 405 ntBASIC15.52■□□□□ 0.08
AP4S1Q9Y587 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 MPDU1-223ENST00000582151 728 ntBASIC15.52■□□□□ 0.08
AP4S1Q9Y587 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.52■□□□□ 0.08
AP4S1Q9Y587 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
AP4S1Q9Y587 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4S1Q9Y587 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4S1Q9Y587 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4S1Q9Y587 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
AP4S1Q9Y587 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
AP4S1Q9Y587 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
AP4S1Q9Y587 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
AP4S1Q9Y587 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
AP4S1Q9Y587 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.51■□□□□ 0.07
AP4S1Q9Y587 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms