Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 AL031008.1-201ENST00000619963 541 ntBASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
R3HCC1Q9Y3T6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 BANP-203ENST00000393207 2438 ntTSL 2 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 AC132938.5-201ENST00000624980 1813 ntBASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 SPDYE21P-201ENST00000413323 827 ntBASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 AL139327.4-201ENST00000612362 153 ntBASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 AL022326.1-202ENST00000641533 845 ntBASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 MTHFR-217ENST00000641820 1569 ntBASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
R3HCC1Q9Y3T6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
R3HCC1Q9Y3T6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 SLC25A1P3-201ENST00000395415 828 ntBASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 AC079781.3-201ENST00000449110 356 ntBASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 NKAPP1-205ENST00000585790 367 ntBASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 HLA-A-202ENST00000376806 1854 ntBASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 AC023908.3-201ENST00000564211 3047 ntBASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 SIGLEC16-201ENST00000599858 1437 ntBASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 AC139749.1-202ENST00000617529 3139 ntBASIC18.83■□□□□ 0.6
R3HCC1Q9Y3T6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 AC010491.1-201ENST00000563101 2797 ntBASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 AC009336.1-201ENST00000608941 1553 ntBASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.82■□□□□ 0.6
R3HCC1Q9Y3T6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms