Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 DGCR5-201ENST00000399539 862 ntBASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 HAUS4P1-201ENST00000406739 1145 ntBASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HPS5Q9UPZ3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AP006294.1-201ENST00000415407 339 ntBASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AC104794.3-201ENST00000566840 1248 ntBASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 AL009183.1-201ENST00000603760 355 ntBASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
HPS5Q9UPZ3 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 AC109635.5-201ENST00000533593 962 ntBASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 TNRC18P3-201ENST00000441896 2691 ntBASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.4■□□□□ 0.7
HPS5Q9UPZ3 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms