Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 AC133552.6-201ENST00000613406 534 ntBASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 MIR6775-201ENST00000617557 69 ntBASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC23.88■■□□□ 1.41
SHANK2Q9UPX8 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 BNIP3P42-201ENST00000454982 569 ntBASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 BNIP3P29-201ENST00000598302 571 ntBASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AC011447.5-201ENST00000616168 564 ntBASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 KRT18P43-201ENST00000469825 1281 ntBASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AC120045.2-201ENST00000567334 178 ntBASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AL450472.2-201ENST00000603663 1156 ntBASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC23.87■■□□□ 1.41
SHANK2Q9UPX8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 REXO1L1P-202ENST00000608646 1974 ntBASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 AC005052.1-201ENST00000625181 2492 ntBASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 VILL-207ENST00000465644 1857 ntTSL 5 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 ACTBP11-201ENST00000436287 1126 ntBASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 CROCCP4-201ENST00000457096 498 ntBASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 RETN-203ENST00000629642 400 ntTSL 5 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SHANK2Q9UPX8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 CD74-212ENST00000524315 584 ntTSL 5 BASIC23.85■■□□□ 1.41
SHANK2Q9UPX8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms