Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 AC008735.5-201ENST00000623544 497 ntBASIC18.81■□□□□ 0.6
USP25Q9UHP3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 PGM5P2-202ENST00000637225 1043 ntBASIC18.81■□□□□ 0.6
USP25Q9UHP3 AL671710.1-201ENST00000610245 2349 ntBASIC18.81■□□□□ 0.6
USP25Q9UHP3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 AC006058.4-201ENST00000624016 1670 ntBASIC18.81■□□□□ 0.6
USP25Q9UHP3 AL031731.1-201ENST00000642131 2094 ntBASIC18.81■□□□□ 0.6
USP25Q9UHP3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.81■□□□□ 0.6
USP25Q9UHP3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
USP25Q9UHP3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 RPS2P1-201ENST00000434010 821 ntBASIC18.8■□□□□ 0.6
USP25Q9UHP3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 RNPS1P1-201ENST00000507437 918 ntBASIC18.8■□□□□ 0.6
USP25Q9UHP3 IGHV3-65-201ENST00000523210 341 ntBASIC18.8■□□□□ 0.6
USP25Q9UHP3 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.8■□□□□ 0.6
USP25Q9UHP3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
USP25Q9UHP3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
USP25Q9UHP3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.79■□□□□ 0.6
USP25Q9UHP3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms