Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 AC008894.3-201ENST00000624324 3103 ntBASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.14■□□□□ 0.49
BLOC1S4Q9NUP1 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 AL627223.1-201ENST00000416693 442 ntBASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 GPS2P2-201ENST00000430745 888 ntBASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 AP3S2-216ENST00000617003 1561 ntBASIC18.13■□□□□ 0.49
BLOC1S4Q9NUP1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 AC211486.1-202ENST00000416371 468 ntBASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 AC211476.1-201ENST00000503899 468 ntBASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 AP000344.2-201ENST00000512987 629 ntBASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 AC023511.2-201ENST00000618803 211 ntBASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S4Q9NUP1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.11■□□□□ 0.49
BLOC1S4Q9NUP1 HAUS4P1-201ENST00000406739 1145 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms