Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 BX842568.4-201ENST00000421222 227 ntBASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 Z83851.2-201ENST00000609564 659 ntBASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UPF3BQ9BZI7 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 CDC14C-201ENST00000428251 1719 ntBASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 AC018845.2-201ENST00000568326 409 ntBASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 AC021097.1-201ENST00000607902 574 ntBASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 LINC02447-202ENST00000501888 2146 ntBASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.55■□□□□ 0.72
UPF3BQ9BZI7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 AC104109.2-201ENST00000602919 1418 ntBASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 RHOQP3-201ENST00000437982 621 ntBASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 AC096734.2-201ENST00000562054 433 ntBASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 AL592424.1-201ENST00000563624 1536 ntBASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
UPF3BQ9BZI7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
UPF3BQ9BZI7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms