Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AC078925.2-201ENST00000624013 1973 ntBASIC13.32□□□□□ -0.28
ZNF48Q96MX3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.32□□□□□ -0.28
ZNF48Q96MX3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AC012645.4-201ENST00000610691 1061 ntBASIC13.32□□□□□ -0.28
ZNF48Q96MX3 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AC007967.4-201ENST00000614700 386 ntBASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AL138828.2-201ENST00000615812 383 ntBASIC13.32□□□□□ -0.28
ZNF48Q96MX3 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
ZNF48Q96MX3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 AC005225.4-201ENST00000557330 545 ntBASIC13.31□□□□□ -0.28
ZNF48Q96MX3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC13.31□□□□□ -0.28
ZNF48Q96MX3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms