Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SNX27Q96L92 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
SNX27Q96L92 NKILA-202ENST00000614771 2598 ntBASIC17.6■□□□□ 0.41
SNX27Q96L92 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SNX27Q96L92 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SNX27Q96L92 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNX27Q96L92 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SNX27Q96L92 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SNX27Q96L92 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX27Q96L92 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX27Q96L92 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX27Q96L92 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 CETN4P-206ENST00000642099 2168 ntBASIC17.59■□□□□ 0.41
SNX27Q96L92 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX27Q96L92 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SNX27Q96L92 AL592424.1-201ENST00000563624 1536 ntBASIC17.59■□□□□ 0.41
SNX27Q96L92 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX27Q96L92 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.59■□□□□ 0.41
SNX27Q96L92 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SNX27Q96L92 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX27Q96L92 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.59■□□□□ 0.41
SNX27Q96L92 AC241585.1-201ENST00000433527 519 ntBASIC17.59■□□□□ 0.41
SNX27Q96L92 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX27Q96L92 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.59■□□□□ 0.41
SNX27Q96L92 MIR4321-201ENST00000592276 80 ntBASIC17.59■□□□□ 0.41
SNX27Q96L92 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.59■□□□□ 0.41
SNX27Q96L92 AL589739.1-201ENST00000607720 493 ntBASIC17.59■□□□□ 0.41
SNX27Q96L92 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SNX27Q96L92 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SNX27Q96L92 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.59■□□□□ 0.41
SNX27Q96L92 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SNX27Q96L92 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX27Q96L92 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX27Q96L92 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.58■□□□□ 0.41
SNX27Q96L92 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX27Q96L92 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX27Q96L92 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX27Q96L92 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX27Q96L92 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
SNX27Q96L92 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SNX27Q96L92 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX27Q96L92 AL080243.2-201ENST00000418783 582 ntBASIC17.58■□□□□ 0.4
SNX27Q96L92 TSSK5P-201ENST00000423978 907 ntBASIC17.58■□□□□ 0.4
SNX27Q96L92 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.58■□□□□ 0.4
SNX27Q96L92 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.58■□□□□ 0.4
SNX27Q96L92 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 FAM207CP-201ENST00000443486 507 ntBASIC17.58■□□□□ 0.4
SNX27Q96L92 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SNX27Q96L92 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.58■□□□□ 0.4
SNX27Q96L92 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.58■□□□□ 0.4
SNX27Q96L92 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.58■□□□□ 0.4
SNX27Q96L92 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.58■□□□□ 0.4
SNX27Q96L92 TEX28P1-201ENST00000613479 1221 ntBASIC17.58■□□□□ 0.4
SNX27Q96L92 TEX28P2-201ENST00000617764 1221 ntBASIC17.58■□□□□ 0.4
SNX27Q96L92 AL590560.3-201ENST00000623350 461 ntBASIC17.58■□□□□ 0.4
SNX27Q96L92 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
SNX27Q96L92 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SNX27Q96L92 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX27Q96L92 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SNX27Q96L92 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.57■□□□□ 0.4
SNX27Q96L92 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SNX27Q96L92 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNX27Q96L92 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX27Q96L92 RPL37AP1-201ENST00000412502 279 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 COX5BP8-201ENST00000416911 349 ntBASIC17.57■□□□□ 0.4
SNX27Q96L92 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.57■□□□□ 0.4
SNX27Q96L92 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms