Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 RPS2P1-201ENST00000434010 821 ntBASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 AF186996.4-201ENST00000467186 377 ntBASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 RNPS1P1-201ENST00000507437 918 ntBASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 OR7E14P-202ENST00000530490 1290 ntBASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 AC092850.2-201ENST00000623821 2697 ntBASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RTN4IP1Q8WWV3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 AC243591.1-201ENST00000452967 1364 ntBASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 AC079781.3-201ENST00000449110 356 ntBASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 AP005117.1-202ENST00000581724 1908 ntBASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RTN4IP1Q8WWV3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.83□□□□□ -0.19
RTN4IP1Q8WWV3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.83□□□□□ -0.19
RTN4IP1Q8WWV3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTN4IP1Q8WWV3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
RTN4IP1Q8WWV3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
RTN4IP1Q8WWV3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
RTN4IP1Q8WWV3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms