Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 AC023141.13-201ENST00000604991 943 ntBASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 AC104109.2-201ENST00000602919 1418 ntBASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
TRAF3IP1Q8TDR0 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 REXO1L8P-201ENST00000604378 1897 ntBASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAF3IP1Q8TDR0 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 AC008894.3-201ENST00000624324 3103 ntBASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAF3IP1Q8TDR0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms