Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 KRT8P23-201ENST00000560090 1207 ntBASIC17.33■□□□□ 0.36
UBA3Q8TBC4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 SPTSSB-204ENST00000617024 1292 ntBASIC17.33■□□□□ 0.36
UBA3Q8TBC4 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 U82695.1-201ENST00000635752 1889 ntBASIC17.33■□□□□ 0.36
UBA3Q8TBC4 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.33■□□□□ 0.36
UBA3Q8TBC4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 AC006449.6-201ENST00000612330 2296 ntBASIC17.32■□□□□ 0.36
UBA3Q8TBC4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 LINC02199-201ENST00000506655 2702 ntBASIC17.32■□□□□ 0.36
UBA3Q8TBC4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
UBA3Q8TBC4 AL592424.1-201ENST00000563624 1536 ntBASIC17.31■□□□□ 0.36
UBA3Q8TBC4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 KRT18P32-201ENST00000424695 1287 ntBASIC17.31■□□□□ 0.36
UBA3Q8TBC4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 AP001160.2-201ENST00000596071 487 ntBASIC17.31■□□□□ 0.36
UBA3Q8TBC4 AC027612.4-201ENST00000605371 583 ntBASIC17.31■□□□□ 0.36
UBA3Q8TBC4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
UBA3Q8TBC4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms