Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SMARCC2Q8TAQ2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 TIMM8BP1-201ENST00000452384 211 ntBASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 AP000344.2-201ENST00000512987 629 ntBASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 FAM86C2P-203ENST00000528684 1004 ntBASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 AC026120.1-201ENST00000611536 926 ntBASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 AC105339.1-204ENST00000636249 355 ntBASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SMARCC2Q8TAQ2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCC2Q8TAQ2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC19.14■□□□□ 0.66
SMARCC2Q8TAQ2 CDC14C-201ENST00000428251 1719 ntBASIC19.14■□□□□ 0.66
SMARCC2Q8TAQ2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC19.14■□□□□ 0.66
SMARCC2Q8TAQ2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
SMARCC2Q8TAQ2 AC112504.1-201ENST00000623415 1841 ntBASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 TFAMP1-201ENST00000412727 736 ntBASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 ADH5P3-201ENST00000433842 1137 ntBASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 SPDYE11-202ENST00000450699 704 ntBASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 RARRES2P8-201ENST00000566335 367 ntBASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 SPDYE9P-201ENST00000570642 692 ntBASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 SPDYE10P-202ENST00000612005 668 ntBASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 SPDYE8P-202ENST00000612377 668 ntBASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SMARCC2Q8TAQ2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 AC093724.1-201ENST00000448659 1027 ntBASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 AL513210.1-201ENST00000629608 234 ntBASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.13■□□□□ 0.65
SMARCC2Q8TAQ2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms