Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 TTTY23B-201ENST00000442790 549 ntBASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 RAB43P1-201ENST00000561790 589 ntBASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 MIR6805-201ENST00000615055 62 ntBASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 AC060834.1-201ENST00000443027 2032 ntBASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS3Q8IXF0 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NPAS3Q8IXF0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS3Q8IXF0 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS3Q8IXF0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS3Q8IXF0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS3Q8IXF0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC098850.1-201ENST00000419919 790 ntBASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC092337.1-201ENST00000568699 1129 ntBASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC093726.1-201ENST00000608064 963 ntBASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC080080.1-201ENST00000625121 2420 ntBASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC106820.2-201ENST00000563775 3264 ntBASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 AC012313.1-201ENST00000593393 3059 ntBASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS3Q8IXF0 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
NPAS3Q8IXF0 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms