Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 WASH6P-202ENST00000359512 1437 ntBASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 AL589702.1-201ENST00000641229 1509 ntBASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 ZNF259P1-201ENST00000407656 1365 ntBASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC20.2■□□□□ 0.82
CHD1LQ86WJ1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 AC106730.1-201ENST00000566722 1090 ntBASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CHD1LQ86WJ1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 AC002347.1-201ENST00000569543 541 ntBASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 AC140113.2-201ENST00000604370 208 ntBASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 AC099522.2-201ENST00000607001 744 ntBASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 AL161645.1-201ENST00000622716 1255 ntBASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CHD1LQ86WJ1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CHD1LQ86WJ1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms