Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SWSAP1Q6NVH7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 AC236430.1-201ENST00000402231 743 ntBASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 MRPS18AP1-201ENST00000414458 589 ntBASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 RN7SL204P-201ENST00000582831 262 ntBASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 MIR4321-201ENST00000592276 80 ntBASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 AC026979.3-201ENST00000607315 403 ntBASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SWSAP1Q6NVH7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.14■□□□□ 0.5
SWSAP1Q6NVH7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
SWSAP1Q6NVH7 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC18.14■□□□□ 0.5
SWSAP1Q6NVH7 AL592424.1-201ENST00000563624 1536 ntBASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 REXO1L8P-201ENST00000604378 1897 ntBASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 AC138761.1-201ENST00000584393 385 ntBASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SWSAP1Q6NVH7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AL080243.2-201ENST00000418783 582 ntBASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AC002472.2-201ENST00000442739 958 ntBASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AL139010.1-201ENST00000454878 894 ntBASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 AC087499.5-201ENST00000452760 1342 ntBASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SWSAP1Q6NVH7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 AC009053.2-201ENST00000563701 2365 ntBASIC18.12■□□□□ 0.49
SWSAP1Q6NVH7 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms