Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 ATF5-205ENST00000600336 682 ntTSL 2 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 PFAS-212ENST00000625942 396 ntTSL 5 BASIC24.27■■□□□ 1.48
CDC42BPAQ5VT25 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 GPR182-203ENST00000622922 591 ntBASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 AC020907.1-201ENST00000616460 1350 ntBASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CDC42BPAQ5VT25 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 TP73-209ENST00000603362 1668 ntTSL 5 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 C1QBPP1-201ENST00000400117 770 ntBASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 AC022137.2-201ENST00000503482 481 ntBASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 IGHV3OR16-16-201ENST00000563644 343 ntBASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC24.25■■□□□ 1.47
CDC42BPAQ5VT25 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 RPL13AP25-201ENST00000484130 612 ntBASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 BAATP1-201ENST00000412284 1225 ntBASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 RHOXF1P1-202ENST00000635473 501 ntBASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CDC42BPAQ5VT25 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 CMC2-214ENST00000565925 640 ntTSL 5 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 AL450472.2-201ENST00000603663 1156 ntBASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 AC244093.1-201ENST00000610837 814 ntBASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 METTL26-214ENST00000614890 801 ntTSL 3 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
CDC42BPAQ5VT25 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 AC015910.1-201ENST00000579400 975 ntBASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC24.22■■□□□ 1.47
CDC42BPAQ5VT25 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms