Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 LINC00895-201ENST00000629028 1637 ntBASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.62■□□□□ 0.25
KHDC1Q4VXA5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 AL391256.1-201ENST00000443260 1855 ntBASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 ALOX12P2-203ENST00000570921 1945 ntBASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 MCCD1P2-201ENST00000423228 335 ntBASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 AC074386.1-202ENST00000463561 864 ntBASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 ALG1L5P-201ENST00000482043 771 ntBASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KHDC1Q4VXA5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AC092865.5-201ENST00000545435 363 ntBASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AC087641.1-201ENST00000557561 1021 ntBASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AL031432.2-201ENST00000566714 459 ntBASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AL928711.1-201ENST00000570165 459 ntBASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AC010327.4-202ENST00000591484 748 ntBASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AC013467.2-201ENST00000605472 835 ntBASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 AL645728.2-201ENST00000641974 660 ntBASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
KHDC1Q4VXA5 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms