Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
SHROOM1Q2M3G4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 SDHAP3-202ENST00000515467 728 ntBASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 MIR8072-201ENST00000614241 80 ntBASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SHROOM1Q2M3G4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 ARSEP1-201ENST00000420443 635 ntBASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 KRT17P7-201ENST00000451704 1104 ntBASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 ELK1P1-201ENST00000485699 580 ntBASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 AC093004.1-201ENST00000508850 424 ntBASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 TPRX2P-201ENST00000535362 881 ntBASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SHROOM1Q2M3G4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 TMEM14DP-201ENST00000422205 345 ntBASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 LINC01115-203ENST00000606068 577 ntBASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SHROOM1Q2M3G4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHROOM1Q2M3G4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms