Protein–RNA interactions for Protein: Q16695

HIST3H3, Histone H3.1t, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H3Q16695 MIR4321-201ENST00000592276 80 ntBASIC14.43□□□□□ -0.1
HIST3H3Q16695 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.43□□□□□ -0.1
HIST3H3Q16695 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HIST3H3Q16695 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HIST3H3Q16695 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.43□□□□□ -0.1
HIST3H3Q16695 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 AC069224.1-201ENST00000566372 1715 ntBASIC14.43□□□□□ -0.1
HIST3H3Q16695 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HIST3H3Q16695 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HIST3H3Q16695 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HIST3H3Q16695 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 AC011270.2-201ENST00000624293 2550 ntBASIC14.42□□□□□ -0.1
HIST3H3Q16695 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 CDC14C-201ENST00000428251 1719 ntBASIC14.42□□□□□ -0.1
HIST3H3Q16695 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 AC027307.2-201ENST00000591252 911 ntBASIC14.42□□□□□ -0.1
HIST3H3Q16695 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 AC084121.4-201ENST00000641598 221 ntBASIC14.42□□□□□ -0.1
HIST3H3Q16695 AF228730.8-201ENST00000642140 221 ntBASIC14.42□□□□□ -0.1
HIST3H3Q16695 AC112504.1-201ENST00000623415 1841 ntBASIC14.42□□□□□ -0.1
HIST3H3Q16695 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.42□□□□□ -0.1
HIST3H3Q16695 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.42□□□□□ -0.1
HIST3H3Q16695 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HIST3H3Q16695 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HIST3H3Q16695 AC142381.1-201ENST00000426099 345 ntBASIC14.41□□□□□ -0.1
HIST3H3Q16695 SPCS2P4-201ENST00000436160 681 ntBASIC14.41□□□□□ -0.1
HIST3H3Q16695 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 ALG1L5P-201ENST00000482043 771 ntBASIC14.41□□□□□ -0.1
HIST3H3Q16695 AC079140.1-201ENST00000508039 487 ntBASIC14.41□□□□□ -0.1
HIST3H3Q16695 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.41□□□□□ -0.1
HIST3H3Q16695 YBX1P5-201ENST00000509441 847 ntBASIC14.41□□□□□ -0.1
HIST3H3Q16695 KRT8P48-201ENST00000515599 1220 ntBASIC14.41□□□□□ -0.1
HIST3H3Q16695 KRT8P23-201ENST00000560090 1207 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms