Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.54□□□□□ -0.56
PRKDCP78527 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PRKDCP78527 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
PRKDCP78527 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
PRKDCP78527 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRKDCP78527 AC012362.1-201ENST00000434906 739 ntBASIC11.54□□□□□ -0.56
PRKDCP78527 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC11.54□□□□□ -0.56
PRKDCP78527 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC11.54□□□□□ -0.56
PRKDCP78527 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PRKDCP78527 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PRKDCP78527 AC145423.3-201ENST00000615987 467 ntBASIC11.54□□□□□ -0.56
PRKDCP78527 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.54□□□□□ -0.56
PRKDCP78527 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
PRKDCP78527 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PRKDCP78527 AGER-206ENST00000375070 1463 ntTSL 5 BASIC11.54□□□□□ -0.56
PRKDCP78527 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PRKDCP78527 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRKDCP78527 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC11.54□□□□□ -0.56
PRKDCP78527 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRKDCP78527 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
PRKDCP78527 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PRKDCP78527 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRKDCP78527 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRKDCP78527 CNN2P10-201ENST00000443067 918 ntBASIC11.54□□□□□ -0.56
PRKDCP78527 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRKDCP78527 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PRKDCP78527 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
PRKDCP78527 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC11.54□□□□□ -0.56
PRKDCP78527 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
PRKDCP78527 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 AC026410.1-201ENST00000507366 1101 ntBASIC11.53□□□□□ -0.56
PRKDCP78527 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
PRKDCP78527 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
PRKDCP78527 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 MIR1202-201ENST00000408529 83 ntBASIC11.53□□□□□ -0.56
PRKDCP78527 HIST2H2BB-201ENST00000449108 381 ntBASIC11.53□□□□□ -0.56
PRKDCP78527 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC11.53□□□□□ -0.56
PRKDCP78527 AC138894.2-201ENST00000602838 371 ntBASIC11.53□□□□□ -0.56
PRKDCP78527 AC013467.2-201ENST00000605472 835 ntBASIC11.53□□□□□ -0.56
PRKDCP78527 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC11.53□□□□□ -0.56
PRKDCP78527 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC11.53□□□□□ -0.56
PRKDCP78527 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
PRKDCP78527 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.53□□□□□ -0.56
PRKDCP78527 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
PRKDCP78527 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.53□□□□□ -0.56
PRKDCP78527 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.53□□□□□ -0.56
PRKDCP78527 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
PRKDCP78527 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.53□□□□□ -0.56
PRKDCP78527 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
PRKDCP78527 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
PRKDCP78527 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
PRKDCP78527 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
PRKDCP78527 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PRKDCP78527 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.56
PRKDCP78527 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRKDCP78527 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PRKDCP78527 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRKDCP78527 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRKDCP78527 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC11.52□□□□□ -0.56
PRKDCP78527 KRT18P64-201ENST00000434946 1219 ntBASIC11.52□□□□□ -0.56
PRKDCP78527 AC098935.1-201ENST00000446057 611 ntBASIC11.52□□□□□ -0.56
PRKDCP78527 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.52□□□□□ -0.56
PRKDCP78527 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
PRKDCP78527 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
PRKDCP78527 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC11.52□□□□□ -0.56
PRKDCP78527 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC11.52□□□□□ -0.56
PRKDCP78527 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.52□□□□□ -0.56
PRKDCP78527 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PRKDCP78527 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PRKDCP78527 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.56
PRKDCP78527 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
PRKDCP78527 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PRKDCP78527 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC11.52□□□□□ -0.57
PRKDCP78527 AC138028.4-201ENST00000564984 1845 ntBASIC11.52□□□□□ -0.57
PRKDCP78527 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PRKDCP78527 AL133267.1-201ENST00000398220 340 ntBASIC11.52□□□□□ -0.57
PRKDCP78527 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC11.52□□□□□ -0.57
PRKDCP78527 PTPA-218ENST00000435132 618 ntTSL 2 BASIC11.52□□□□□ -0.57
PRKDCP78527 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC11.52□□□□□ -0.57
PRKDCP78527 EEF1DP4-201ENST00000446006 880 ntBASIC11.52□□□□□ -0.57
PRKDCP78527 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC11.52□□□□□ -0.57
PRKDCP78527 AL118516.1-201ENST00000564152 670 ntBASIC11.52□□□□□ -0.57
PRKDCP78527 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC11.52□□□□□ -0.57
PRKDCP78527 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms