Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.11■□□□□ 0.33
IRX4P78413 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.11■□□□□ 0.33
IRX4P78413 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.11■□□□□ 0.33
IRX4P78413 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.11■□□□□ 0.33
IRX4P78413 STK25P1-201ENST00000585406 838 ntBASIC17.11■□□□□ 0.33
IRX4P78413 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.11■□□□□ 0.33
IRX4P78413 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.11■□□□□ 0.33
IRX4P78413 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IRX4P78413 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
IRX4P78413 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
IRX4P78413 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
IRX4P78413 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.11■□□□□ 0.33
IRX4P78413 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.11■□□□□ 0.33
IRX4P78413 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
IRX4P78413 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
IRX4P78413 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.11■□□□□ 0.33
IRX4P78413 EGFEM1P-202ENST00000431685 1563 ntBASIC17.11■□□□□ 0.33
IRX4P78413 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.11■□□□□ 0.33
IRX4P78413 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IRX4P78413 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
IRX4P78413 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 AL390955.2-201ENST00000603032 514 ntBASIC17.1■□□□□ 0.33
IRX4P78413 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX4P78413 AC092919.2-201ENST00000623631 1645 ntBASIC17.1■□□□□ 0.33
IRX4P78413 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX4P78413 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX4P78413 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX4P78413 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.09■□□□□ 0.33
IRX4P78413 RNA5SP421-201ENST00000516864 134 ntBASIC17.09■□□□□ 0.33
IRX4P78413 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.09■□□□□ 0.33
IRX4P78413 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
IRX4P78413 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 DUX4L27-201ENST00000554796 1261 ntBASIC17.09■□□□□ 0.33
IRX4P78413 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 AJ011932.1-201ENST00000621707 465 ntBASIC17.09■□□□□ 0.33
IRX4P78413 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.09■□□□□ 0.33
IRX4P78413 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX4P78413 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX4P78413 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IRX4P78413 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX4P78413 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms