Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN6P56747 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN6P56747 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
CLDN6P56747 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
CLDN6P56747 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN6P56747 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.66■□□□□ 0.1
CLDN6P56747 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN6P56747 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN6P56747 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.66■□□□□ 0.1
CLDN6P56747 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.66■□□□□ 0.1
CLDN6P56747 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.66■□□□□ 0.1
CLDN6P56747 AC106886.1-201ENST00000568660 600 ntBASIC15.66■□□□□ 0.1
CLDN6P56747 MIR4538-201ENST00000581377 78 ntBASIC15.66■□□□□ 0.1
CLDN6P56747 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.66■□□□□ 0.1
CLDN6P56747 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.66■□□□□ 0.1
CLDN6P56747 WFDC1-204ENST00000613603 549 ntBASIC15.66■□□□□ 0.1
CLDN6P56747 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CLDN6P56747 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN6P56747 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 CROCCP2-202ENST00000412962 2773 ntBASIC15.66■□□□□ 0.1
CLDN6P56747 AC106820.2-201ENST00000563775 3264 ntBASIC15.66■□□□□ 0.1
CLDN6P56747 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CLDN6P56747 PRORSD1P-202ENST00000563365 2154 ntBASIC15.66■□□□□ 0.1
CLDN6P56747 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.66■□□□□ 0.1
CLDN6P56747 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CLDN6P56747 CROCCP1-201ENST00000426910 5675 ntBASIC15.66■□□□□ 0.1
CLDN6P56747 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLDN6P56747 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLDN6P56747 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
CLDN6P56747 AC234783.1-201ENST00000441761 496 ntBASIC15.65■□□□□ 0.1
CLDN6P56747 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN6P56747 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.65■□□□□ 0.1
CLDN6P56747 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 MIR4525-201ENST00000580000 75 ntBASIC15.65■□□□□ 0.1
CLDN6P56747 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
CLDN6P56747 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CLDN6P56747 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 OR6D1P-203ENST00000641209 4860 ntBASIC15.65■□□□□ 0.1
CLDN6P56747 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.65■□□□□ 0.1
CLDN6P56747 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CLDN6P56747 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC15.65■□□□□ 0.1
CLDN6P56747 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
CLDN6P56747 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN6P56747 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CLDN6P56747 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 PCDHB17P-201ENST00000539533 2393 ntBASIC15.64■□□□□ 0.09
CLDN6P56747 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.64■□□□□ 0.09
CLDN6P56747 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CLDN6P56747 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms