Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
AIF1P55008 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
AIF1P55008 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
AIF1P55008 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
AIF1P55008 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
AIF1P55008 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
AIF1P55008 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.83■□□□□ 0.28
AIF1P55008 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
AIF1P55008 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.83■□□□□ 0.28
AIF1P55008 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 KRT18P32-201ENST00000424695 1287 ntBASIC16.83■□□□□ 0.28
AIF1P55008 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.83■□□□□ 0.28
AIF1P55008 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.83■□□□□ 0.28
AIF1P55008 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
AIF1P55008 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 RNA5SP410-201ENST00000516285 106 ntBASIC16.83■□□□□ 0.28
AIF1P55008 AP001282.1-201ENST00000531301 1499 ntBASIC16.83■□□□□ 0.28
AIF1P55008 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
AIF1P55008 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AIF1P55008 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 AL603832.2-201ENST00000566195 2125 ntBASIC16.82■□□□□ 0.28
AIF1P55008 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.82■□□□□ 0.28
AIF1P55008 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.82■□□□□ 0.28
AIF1P55008 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
AIF1P55008 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
AIF1P55008 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
AIF1P55008 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.82■□□□□ 0.28
AIF1P55008 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.82■□□□□ 0.28
AIF1P55008 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.82■□□□□ 0.28
AIF1P55008 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
AIF1P55008 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
AIF1P55008 AC023511.2-201ENST00000618803 211 ntBASIC16.82■□□□□ 0.28
AIF1P55008 AC009093.7-201ENST00000623853 1223 ntBASIC16.82■□□□□ 0.28
AIF1P55008 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AIF1P55008 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AIF1P55008 PCDH8P1-201ENST00000428983 2773 ntBASIC16.82■□□□□ 0.28
AIF1P55008 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.81■□□□□ 0.28
AIF1P55008 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
AIF1P55008 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.81■□□□□ 0.28
AIF1P55008 AC004967.1-201ENST00000453589 447 ntBASIC16.81■□□□□ 0.28
AIF1P55008 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.81■□□□□ 0.28
AIF1P55008 AC023141.5-201ENST00000458585 616 ntBASIC16.81■□□□□ 0.28
AIF1P55008 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AIF1P55008 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.81■□□□□ 0.28
AIF1P55008 RARRES2P9-201ENST00000565168 469 ntBASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms