Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.95■□□□□ 0.46
ATN1P54259 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ATN1P54259 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.95■□□□□ 0.46
ATN1P54259 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.95■□□□□ 0.46
ATN1P54259 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.95■□□□□ 0.46
ATN1P54259 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ATN1P54259 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
ATN1P54259 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC17.95■□□□□ 0.46
ATN1P54259 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.95■□□□□ 0.46
ATN1P54259 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.95■□□□□ 0.46
ATN1P54259 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.95■□□□□ 0.46
ATN1P54259 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.95■□□□□ 0.46
ATN1P54259 TDH-203ENST00000531764 1110 ntBASIC17.95■□□□□ 0.46
ATN1P54259 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.95■□□□□ 0.46
ATN1P54259 AGER-214ENST00000538695 487 ntTSL 2 BASIC17.95■□□□□ 0.46
ATN1P54259 AC115989.2-201ENST00000578640 563 ntBASIC17.95■□□□□ 0.46
ATN1P54259 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 CU634019.7-201ENST00000624153 1185 ntBASIC17.95■□□□□ 0.46
ATN1P54259 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.95■□□□□ 0.46
ATN1P54259 FP236241.2-201ENST00000624906 1185 ntBASIC17.95■□□□□ 0.46
ATN1P54259 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.95■□□□□ 0.46
ATN1P54259 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.95■□□□□ 0.46
ATN1P54259 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.95■□□□□ 0.46
ATN1P54259 AC040160.2-201ENST00000623816 1675 ntBASIC17.95■□□□□ 0.46
ATN1P54259 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.95■□□□□ 0.46
ATN1P54259 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 KRT8P22-201ENST00000562317 1415 ntBASIC17.95■□□□□ 0.46
ATN1P54259 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ATN1P54259 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.95■□□□□ 0.46
ATN1P54259 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.95■□□□□ 0.46
ATN1P54259 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.95■□□□□ 0.46
ATN1P54259 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.95■□□□□ 0.46
ATN1P54259 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.94■□□□□ 0.46
ATN1P54259 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ATN1P54259 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
ATN1P54259 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.94■□□□□ 0.46
ATN1P54259 FAM21FP-201ENST00000426241 1131 ntBASIC17.94■□□□□ 0.46
ATN1P54259 SDR42E1P3-201ENST00000438345 502 ntBASIC17.94■□□□□ 0.46
ATN1P54259 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.94■□□□□ 0.46
ATN1P54259 RN7SL399P-201ENST00000471648 279 ntBASIC17.94■□□□□ 0.46
ATN1P54259 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.94■□□□□ 0.46
ATN1P54259 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.94■□□□□ 0.46
ATN1P54259 AL031058.1-201ENST00000561592 888 ntBASIC17.94■□□□□ 0.46
ATN1P54259 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.94■□□□□ 0.46
ATN1P54259 AL022328.1-201ENST00000610050 478 ntBASIC17.94■□□□□ 0.46
ATN1P54259 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.94■□□□□ 0.46
ATN1P54259 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATN1P54259 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
ATN1P54259 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
ATN1P54259 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
ATN1P54259 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.94■□□□□ 0.46
ATN1P54259 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.93■□□□□ 0.46
ATN1P54259 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 AC092068.3-201ENST00000587894 2016 ntBASIC17.93■□□□□ 0.46
ATN1P54259 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 AL354751.1-201ENST00000412768 1863 ntBASIC17.93■□□□□ 0.46
ATN1P54259 LINC02012-201ENST00000608206 1725 ntBASIC17.93■□□□□ 0.46
ATN1P54259 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.93■□□□□ 0.46
ATN1P54259 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
ATN1P54259 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 GOLGA2P4-201ENST00000441462 777 ntBASIC17.93■□□□□ 0.46
ATN1P54259 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC17.93■□□□□ 0.46
ATN1P54259 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC17.93■□□□□ 0.46
ATN1P54259 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ATN1P54259 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms