Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 AC078819.1-201ENST00000547454 765 ntBASIC28.65■■■□□ 2.18
SMARCA4P51532 AC012085.1-201ENST00000548270 765 ntBASIC28.65■■■□□ 2.18
SMARCA4P51532 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC28.65■■■□□ 2.18
SMARCA4P51532 COG4-212ENST00000564653 590 ntTSL 5 BASIC28.65■■■□□ 2.18
SMARCA4P51532 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
SMARCA4P51532 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC28.65■■■□□ 2.18
SMARCA4P51532 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC28.65■■■□□ 2.18
SMARCA4P51532 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
SMARCA4P51532 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 VILL-207ENST00000465644 1857 ntTSL 5 BASIC28.65■■■□□ 2.18
SMARCA4P51532 TP73-209ENST00000603362 1668 ntTSL 5 BASIC28.65■■■□□ 2.18
SMARCA4P51532 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC28.65■■■□□ 2.18
SMARCA4P51532 POU5F1P6-201ENST00000466990 990 ntBASIC28.65■■■□□ 2.18
SMARCA4P51532 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA4P51532 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC28.65■■■□□ 2.18
SMARCA4P51532 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC28.65■■■□□ 2.18
SMARCA4P51532 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
SMARCA4P51532 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA4P51532 DRD5P1-201ENST00000456605 1438 ntBASIC28.64■■■□□ 2.18
SMARCA4P51532 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC28.64■■■□□ 2.18
SMARCA4P51532 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA4P51532 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA4P51532 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA4P51532 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA4P51532 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA4P51532 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC28.64■■■□□ 2.18
SMARCA4P51532 AHRR-211ENST00000515206 462 ntTSL 5 BASIC28.64■■■□□ 2.18
SMARCA4P51532 RN7SL190P-201ENST00000582519 257 ntBASIC28.64■■■□□ 2.18
SMARCA4P51532 AC138951.2-201ENST00000623455 1161 ntBASIC28.64■■■□□ 2.18
SMARCA4P51532 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC28.64■■■□□ 2.18
SMARCA4P51532 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.64■■■□□ 2.17
SMARCA4P51532 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
SMARCA4P51532 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.17
SMARCA4P51532 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.17
SMARCA4P51532 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC28.63■■■□□ 2.17
SMARCA4P51532 PCDHB18P-201ENST00000524813 2368 ntBASIC28.63■■■□□ 2.17
SMARCA4P51532 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCA4P51532 PARP8-206ENST00000503665 572 ntTSL 4 BASIC28.63■■■□□ 2.17
SMARCA4P51532 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCA4P51532 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC28.63■■■□□ 2.17
SMARCA4P51532 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC28.63■■■□□ 2.17
SMARCA4P51532 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCA4P51532 AL607033.1-201ENST00000623900 1599 ntBASIC28.63■■■□□ 2.17
SMARCA4P51532 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
SMARCA4P51532 AC009053.2-201ENST00000563701 2365 ntBASIC28.63■■■□□ 2.17
SMARCA4P51532 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC28.63■■■□□ 2.17
SMARCA4P51532 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC28.63■■■□□ 2.17
SMARCA4P51532 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC28.63■■■□□ 2.17
SMARCA4P51532 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
SMARCA4P51532 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCA4P51532 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCA4P51532 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCA4P51532 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
SMARCA4P51532 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCA4P51532 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCA4P51532 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC28.62■■■□□ 2.17
SMARCA4P51532 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCA4P51532 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC28.62■■■□□ 2.17
SMARCA4P51532 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC28.62■■■□□ 2.17
SMARCA4P51532 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC28.62■■■□□ 2.17
SMARCA4P51532 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC28.62■■■□□ 2.17
SMARCA4P51532 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SMARCA4P51532 AC141586.5-201ENST00000624546 2050 ntBASIC28.62■■■□□ 2.17
SMARCA4P51532 AC006001.1-201ENST00000325130 474 ntBASIC28.61■■■□□ 2.17
SMARCA4P51532 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
SMARCA4P51532 SLC25A24P2-201ENST00000415059 510 ntBASIC28.61■■■□□ 2.17
SMARCA4P51532 SCARNA20.5-201ENST00000516991 142 ntBASIC28.61■■■□□ 2.17
SMARCA4P51532 AP006547.1-201ENST00000563435 692 ntBASIC28.61■■■□□ 2.17
SMARCA4P51532 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC28.61■■■□□ 2.17
SMARCA4P51532 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC28.61■■■□□ 2.17
SMARCA4P51532 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC28.61■■■□□ 2.17
SMARCA4P51532 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC28.61■■■□□ 2.17
SMARCA4P51532 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC28.61■■■□□ 2.17
SMARCA4P51532 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC28.61■■■□□ 2.17
SMARCA4P51532 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC28.61■■■□□ 2.17
SMARCA4P51532 AL138709.1-201ENST00000614840 1693 ntBASIC28.61■■■□□ 2.17
SMARCA4P51532 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
SMARCA4P51532 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
SMARCA4P51532 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC28.61■■■□□ 2.17
SMARCA4P51532 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
SMARCA4P51532 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
SMARCA4P51532 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
SMARCA4P51532 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC28.61■■■□□ 2.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms