Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC6A12P48065 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 GPX1P2-201ENST00000429271 606 ntBASIC15.76■□□□□ 0.11
SLC6A12P48065 SPCS2P4-201ENST00000436160 681 ntBASIC15.76■□□□□ 0.11
SLC6A12P48065 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 KRT8P48-201ENST00000515599 1220 ntBASIC15.76■□□□□ 0.11
SLC6A12P48065 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC6A12P48065 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 LINC01225-203ENST00000563550 1244 ntBASIC15.76■□□□□ 0.11
SLC6A12P48065 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A12P48065 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A12P48065 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A12P48065 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SLC6A12P48065 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 MIR346-201ENST00000362234 95 ntBASIC15.75■□□□□ 0.11
SLC6A12P48065 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 HTR5BP-201ENST00000430851 1154 ntBASIC15.75■□□□□ 0.11
SLC6A12P48065 SPDYE11-202ENST00000450699 704 ntBASIC15.75■□□□□ 0.11
SLC6A12P48065 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.75■□□□□ 0.11
SLC6A12P48065 AC079140.1-201ENST00000508039 487 ntBASIC15.75■□□□□ 0.11
SLC6A12P48065 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.75■□□□□ 0.11
SLC6A12P48065 SPDYE9P-201ENST00000570642 692 ntBASIC15.75■□□□□ 0.11
SLC6A12P48065 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.75■□□□□ 0.11
SLC6A12P48065 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.75■□□□□ 0.11
SLC6A12P48065 SPDYE10P-202ENST00000612005 668 ntBASIC15.75■□□□□ 0.11
SLC6A12P48065 SPDYE8P-202ENST00000612377 668 ntBASIC15.75■□□□□ 0.11
SLC6A12P48065 SPTSSB-204ENST00000617024 1292 ntBASIC15.75■□□□□ 0.11
SLC6A12P48065 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SLC6A12P48065 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.75■□□□□ 0.11
SLC6A12P48065 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.75■□□□□ 0.11
SLC6A12P48065 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SLC6A12P48065 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC6A12P48065 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SLC6A12P48065 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC6A12P48065 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.74■□□□□ 0.11
SLC6A12P48065 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SLC6A12P48065 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
SLC6A12P48065 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.74■□□□□ 0.11
SLC6A12P48065 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms