Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.6■□□□□ 0.25
GRIA1P42261 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.6■□□□□ 0.25
GRIA1P42261 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
GRIA1P42261 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.6■□□□□ 0.25
GRIA1P42261 AC140658.5-201ENST00000438532 169 ntBASIC16.6■□□□□ 0.25
GRIA1P42261 AC093724.1-201ENST00000448659 1027 ntBASIC16.6■□□□□ 0.25
GRIA1P42261 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.6■□□□□ 0.25
GRIA1P42261 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
GRIA1P42261 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.6■□□□□ 0.25
GRIA1P42261 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.6■□□□□ 0.25
GRIA1P42261 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
GRIA1P42261 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 AP005117.1-202ENST00000581724 1908 ntBASIC16.6■□□□□ 0.25
GRIA1P42261 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GRIA1P42261 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.6■□□□□ 0.25
GRIA1P42261 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GRIA1P42261 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 U82695.1-201ENST00000635752 1889 ntBASIC16.59■□□□□ 0.25
GRIA1P42261 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GRIA1P42261 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.59■□□□□ 0.25
GRIA1P42261 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
GRIA1P42261 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.59■□□□□ 0.25
GRIA1P42261 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.59■□□□□ 0.25
GRIA1P42261 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.59■□□□□ 0.25
GRIA1P42261 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.59■□□□□ 0.25
GRIA1P42261 AL078644.1-201ENST00000609881 752 ntBASIC16.59■□□□□ 0.25
GRIA1P42261 AL513190.1-201ENST00000621254 727 ntBASIC16.59■□□□□ 0.25
GRIA1P42261 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.59■□□□□ 0.25
GRIA1P42261 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.59■□□□□ 0.25
GRIA1P42261 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GRIA1P42261 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.59■□□□□ 0.25
GRIA1P42261 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GRIA1P42261 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.59■□□□□ 0.25
GRIA1P42261 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
GRIA1P42261 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GRIA1P42261 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.58■□□□□ 0.24
GRIA1P42261 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.58■□□□□ 0.24
GRIA1P42261 AL590627.1-203ENST00000421194 1026 ntBASIC16.58■□□□□ 0.24
GRIA1P42261 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.58■□□□□ 0.24
GRIA1P42261 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.58■□□□□ 0.24
GRIA1P42261 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.58■□□□□ 0.24
GRIA1P42261 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.58■□□□□ 0.24
GRIA1P42261 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.58■□□□□ 0.24
GRIA1P42261 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.58■□□□□ 0.24
GRIA1P42261 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.58■□□□□ 0.24
GRIA1P42261 AC092865.6-201ENST00000642101 219 ntBASIC16.58■□□□□ 0.24
GRIA1P42261 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
GRIA1P42261 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GRIA1P42261 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
GRIA1P42261 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
GRIA1P42261 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms