Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 FO681548.1-201ENST00000455617 1132 ntBASIC20.36■□□□□ 0.85
RFC4P35249 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.36■□□□□ 0.85
RFC4P35249 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC20.36■□□□□ 0.85
RFC4P35249 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.36■□□□□ 0.85
RFC4P35249 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.36■□□□□ 0.85
RFC4P35249 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.36■□□□□ 0.85
RFC4P35249 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 AC244093.1-201ENST00000610837 814 ntBASIC20.36■□□□□ 0.85
RFC4P35249 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC20.36■□□□□ 0.85
RFC4P35249 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RFC4P35249 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RFC4P35249 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.36■□□□□ 0.85
RFC4P35249 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 PCGF3-213ENST00000620529 1899 ntBASIC20.36■□□□□ 0.85
RFC4P35249 AC090340.1-201ENST00000620778 4980 ntBASIC20.36■□□□□ 0.85
RFC4P35249 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RFC4P35249 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RFC4P35249 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RFC4P35249 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RFC4P35249 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFC4P35249 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFC4P35249 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
RFC4P35249 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RFC4P35249 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
RFC4P35249 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFC4P35249 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFC4P35249 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RFC4P35249 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RFC4P35249 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.35■□□□□ 0.85
RFC4P35249 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFC4P35249 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC20.35■□□□□ 0.85
RFC4P35249 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.35■□□□□ 0.85
RFC4P35249 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.35■□□□□ 0.85
RFC4P35249 AL359711.2-201ENST00000563105 872 ntBASIC20.35■□□□□ 0.85
RFC4P35249 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC20.35■□□□□ 0.85
RFC4P35249 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
RFC4P35249 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
RFC4P35249 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RFC4P35249 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.35■□□□□ 0.85
RFC4P35249 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RFC4P35249 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RFC4P35249 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RFC4P35249 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.34■□□□□ 0.85
RFC4P35249 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.34■□□□□ 0.85
RFC4P35249 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.34■□□□□ 0.85
RFC4P35249 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.34■□□□□ 0.85
RFC4P35249 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.34■□□□□ 0.85
RFC4P35249 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.34■□□□□ 0.85
RFC4P35249 RPL7P3-201ENST00000441388 714 ntBASIC20.34■□□□□ 0.85
RFC4P35249 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.34■□□□□ 0.85
RFC4P35249 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.34■□□□□ 0.85
RFC4P35249 AC103810.3-201ENST00000583567 96 ntBASIC20.34■□□□□ 0.85
RFC4P35249 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC20.34■□□□□ 0.85
RFC4P35249 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.34■□□□□ 0.85
RFC4P35249 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.34■□□□□ 0.85
RFC4P35249 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.34■□□□□ 0.85
RFC4P35249 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
RFC4P35249 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RFC4P35249 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RFC4P35249 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.34■□□□□ 0.85
RFC4P35249 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 OR6D1P-202ENST00000641007 5290 ntBASIC20.33■□□□□ 0.85
RFC4P35249 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC4P35249 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RFC4P35249 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RFC4P35249 AC005229.1-201ENST00000392885 409 ntBASIC20.33■□□□□ 0.85
RFC4P35249 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC4P35249 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC20.33■□□□□ 0.85
RFC4P35249 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.33■□□□□ 0.85
RFC4P35249 FAM86LP-201ENST00000478302 853 ntBASIC20.33■□□□□ 0.85
RFC4P35249 AC108725.1-201ENST00000495472 409 ntBASIC20.33■□□□□ 0.85
RFC4P35249 AGER-214ENST00000538695 487 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC4P35249 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC4P35249 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC20.33■□□□□ 0.85
RFC4P35249 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.33■□□□□ 0.85
RFC4P35249 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms