Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CHRNA1P02708 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA1P02708 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA1P02708 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.66■□□□□ 0.42
CHRNA1P02708 AC112492.5-201ENST00000421897 457 ntBASIC17.66■□□□□ 0.42
CHRNA1P02708 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA1P02708 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA1P02708 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA1P02708 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CHRNA1P02708 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.66■□□□□ 0.42
CHRNA1P02708 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.66■□□□□ 0.42
CHRNA1P02708 AC093726.1-201ENST00000608064 963 ntBASIC17.66■□□□□ 0.42
CHRNA1P02708 MIR8072-201ENST00000614241 80 ntBASIC17.66■□□□□ 0.42
CHRNA1P02708 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA1P02708 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.66■□□□□ 0.42
CHRNA1P02708 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CHRNA1P02708 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CHRNA1P02708 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CHRNA1P02708 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHRNA1P02708 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA1P02708 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA1P02708 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA1P02708 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA1P02708 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CHRNA1P02708 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA1P02708 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA1P02708 ACA64.2-201ENST00000459014 129 ntBASIC17.65■□□□□ 0.42
CHRNA1P02708 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.65■□□□□ 0.42
CHRNA1P02708 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA1P02708 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CHRNA1P02708 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CHRNA1P02708 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CHRNA1P02708 AC106886.1-201ENST00000568660 600 ntBASIC17.65■□□□□ 0.42
CHRNA1P02708 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.65■□□□□ 0.42
CHRNA1P02708 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA1P02708 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CHRNA1P02708 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.65■□□□□ 0.42
CHRNA1P02708 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.65■□□□□ 0.42
CHRNA1P02708 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.64■□□□□ 0.42
CHRNA1P02708 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CHRNA1P02708 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA1P02708 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA1P02708 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA1P02708 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNA1P02708 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRNA1P02708 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.64■□□□□ 0.41
CHRNA1P02708 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.64■□□□□ 0.41
CHRNA1P02708 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.64■□□□□ 0.41
CHRNA1P02708 KRT17P8-201ENST00000540749 863 ntBASIC17.64■□□□□ 0.41
CHRNA1P02708 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.64■□□□□ 0.41
CHRNA1P02708 TIMM17BP1-201ENST00000545713 516 ntBASIC17.64■□□□□ 0.41
CHRNA1P02708 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
CHRNA1P02708 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.64■□□□□ 0.41
CHRNA1P02708 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA1P02708 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHRNA1P02708 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.64■□□□□ 0.41
CHRNA1P02708 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CHRNA1P02708 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CHRNA1P02708 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CHRNA1P02708 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms