Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PTP4A3O75365 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
PTP4A3O75365 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 AC092474.2-201ENST00000424288 719 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 AC098831.1-202ENST00000438821 336 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 AC093724.1-201ENST00000448659 1027 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 HCG4B-203ENST00000450128 991 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC14.76□□□□□ -0.05
PTP4A3O75365 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 RN7SL510P-201ENST00000581311 263 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 MIR7706-201ENST00000613747 67 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.76□□□□□ -0.05
PTP4A3O75365 AL031008.1-201ENST00000619963 541 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 AC116407.3-201ENST00000623905 1129 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
PTP4A3O75365 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
PTP4A3O75365 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.76□□□□□ -0.05
PTP4A3O75365 AC126177.1-201ENST00000547829 2218 ntBASIC14.76□□□□□ -0.05
PTP4A3O75365 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.75□□□□□ -0.05
PTP4A3O75365 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.75□□□□□ -0.05
PTP4A3O75365 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.75□□□□□ -0.05
PTP4A3O75365 CRYGEP-201ENST00000412192 528 ntBASIC14.75□□□□□ -0.05
PTP4A3O75365 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
PTP4A3O75365 RNA5SP419-201ENST00000515908 135 ntBASIC14.75□□□□□ -0.05
PTP4A3O75365 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.75□□□□□ -0.05
PTP4A3O75365 AP002469.2-201ENST00000531724 424 ntBASIC14.75□□□□□ -0.05
PTP4A3O75365 AC109635.5-201ENST00000533593 962 ntBASIC14.75□□□□□ -0.05
PTP4A3O75365 AC096734.2-201ENST00000562054 433 ntBASIC14.75□□□□□ -0.05
PTP4A3O75365 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC14.75□□□□□ -0.05
PTP4A3O75365 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.75□□□□□ -0.05
PTP4A3O75365 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.75□□□□□ -0.05
PTP4A3O75365 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
PTP4A3O75365 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
PTP4A3O75365 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.74□□□□□ -0.05
PTP4A3O75365 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.74□□□□□ -0.05
PTP4A3O75365 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
PTP4A3O75365 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.74□□□□□ -0.05
PTP4A3O75365 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.74□□□□□ -0.05
PTP4A3O75365 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
PTP4A3O75365 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.74□□□□□ -0.05
PTP4A3O75365 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PTP4A3O75365 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
PTP4A3O75365 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms