Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 METTL21AP1-201ENST00000438852 635 ntBASIC16.55■□□□□ 0.24
PRAMEF11O60813 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
PRAMEF11O60813 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRAMEF11O60813 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.54■□□□□ 0.24
PRAMEF11O60813 SPDYE7P-202ENST00000420373 878 ntBASIC16.54■□□□□ 0.24
PRAMEF11O60813 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC069262.1-201ENST00000539058 672 ntBASIC16.54■□□□□ 0.24
PRAMEF11O60813 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC025678.2-201ENST00000562061 970 ntBASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC004449.1-201ENST00000564240 433 ntBASIC16.54■□□□□ 0.24
PRAMEF11O60813 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 AC093028.1-201ENST00000622998 982 ntBASIC16.54■□□□□ 0.24
PRAMEF11O60813 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
PRAMEF11O60813 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PRAMEF11O60813 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 AC008677.1-201ENST00000519230 1561 ntBASIC16.53■□□□□ 0.24
PRAMEF11O60813 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 MIR648-201ENST00000385046 94 ntBASIC16.53■□□□□ 0.24
PRAMEF11O60813 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEF11O60813 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 MIR6080-201ENST00000617359 66 ntBASIC16.53■□□□□ 0.24
PRAMEF11O60813 Z92544.3-201ENST00000624747 417 ntBASIC16.53■□□□□ 0.24
PRAMEF11O60813 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEF11O60813 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms