Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 AL139400.1-201ENST00000366220 510 ntBASIC17.72■□□□□ 0.43
EXTL3O43909 TSEN15P1-201ENST00000423257 515 ntBASIC17.72■□□□□ 0.43
EXTL3O43909 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.72■□□□□ 0.43
EXTL3O43909 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.72■□□□□ 0.43
EXTL3O43909 LINC00628-201ENST00000628516 1289 ntBASIC17.72■□□□□ 0.43
EXTL3O43909 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
EXTL3O43909 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.72■□□□□ 0.43
EXTL3O43909 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.72■□□□□ 0.43
EXTL3O43909 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
EXTL3O43909 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
EXTL3O43909 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.72■□□□□ 0.43
EXTL3O43909 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.71■□□□□ 0.43
EXTL3O43909 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.71■□□□□ 0.43
EXTL3O43909 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.71■□□□□ 0.43
EXTL3O43909 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.71■□□□□ 0.43
EXTL3O43909 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.71■□□□□ 0.43
EXTL3O43909 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.71■□□□□ 0.43
EXTL3O43909 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.71■□□□□ 0.43
EXTL3O43909 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.71■□□□□ 0.43
EXTL3O43909 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
EXTL3O43909 AP001059.3-201ENST00000619053 235 ntBASIC17.71■□□□□ 0.43
EXTL3O43909 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.71■□□□□ 0.43
EXTL3O43909 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.71■□□□□ 0.43
EXTL3O43909 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
EXTL3O43909 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
EXTL3O43909 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EXTL3O43909 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.71■□□□□ 0.42
EXTL3O43909 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
EXTL3O43909 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
EXTL3O43909 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
EXTL3O43909 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.7■□□□□ 0.42
EXTL3O43909 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.7■□□□□ 0.42
EXTL3O43909 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.7■□□□□ 0.42
EXTL3O43909 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.7■□□□□ 0.42
EXTL3O43909 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
EXTL3O43909 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
EXTL3O43909 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
EXTL3O43909 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.7■□□□□ 0.42
EXTL3O43909 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 AC109322.1-201ENST00000524499 1264 ntBASIC17.7■□□□□ 0.42
EXTL3O43909 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.7■□□□□ 0.42
EXTL3O43909 AL512356.2-201ENST00000546955 174 ntBASIC17.7■□□□□ 0.42
EXTL3O43909 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
EXTL3O43909 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.7■□□□□ 0.42
EXTL3O43909 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.7■□□□□ 0.42
EXTL3O43909 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.7■□□□□ 0.42
EXTL3O43909 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.7■□□□□ 0.42
EXTL3O43909 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
EXTL3O43909 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
EXTL3O43909 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
EXTL3O43909 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.69■□□□□ 0.42
EXTL3O43909 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
EXTL3O43909 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.69■□□□□ 0.42
EXTL3O43909 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
EXTL3O43909 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.69■□□□□ 0.42
EXTL3O43909 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
EXTL3O43909 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms