Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 AC093004.1-201ENST00000508850 424 ntBASIC22.21■■□□□ 1.15
NINLQ9Y2I6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 AC092337.1-201ENST00000568699 1129 ntBASIC22.21■■□□□ 1.15
NINLQ9Y2I6 AC074044.1-201ENST00000609673 707 ntBASIC22.21■■□□□ 1.15
NINLQ9Y2I6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 TEX48-202ENST00000612244 662 ntTSL 3 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC22.21■■□□□ 1.15
NINLQ9Y2I6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC22.2■■□□□ 1.15
NINLQ9Y2I6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 AC004987.2-201ENST00000395959 1148 ntBASIC22.2■■□□□ 1.14
NINLQ9Y2I6 DFFBP1-201ENST00000433250 979 ntBASIC22.2■■□□□ 1.14
NINLQ9Y2I6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 SPDYE18-201ENST00000510091 1050 ntBASIC22.2■■□□□ 1.14
NINLQ9Y2I6 SUOX-214ENST00000551841 906 ntTSL 3 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 AC243562.2-201ENST00000561247 970 ntBASIC22.2■■□□□ 1.14
NINLQ9Y2I6 AC025048.3-201ENST00000590609 569 ntBASIC22.2■■□□□ 1.14
NINLQ9Y2I6 AC005702.4-201ENST00000618393 416 ntBASIC22.2■■□□□ 1.14
NINLQ9Y2I6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC22.2■■□□□ 1.14
NINLQ9Y2I6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 RAB35-202ENST00000534951 939 ntTSL 2 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 UBALD1-205ENST00000590891 2641 ntBASIC22.19■■□□□ 1.14
NINLQ9Y2I6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NINLQ9Y2I6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 AL391825.1-201ENST00000457671 1364 ntBASIC22.18■■□□□ 1.14
NINLQ9Y2I6 HCG11-201ENST00000411553 5696 ntBASIC22.18■■□□□ 1.14
NINLQ9Y2I6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 AC011676.5-201ENST00000624864 2660 ntBASIC22.18■■□□□ 1.14
NINLQ9Y2I6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 AC106886.4-201ENST00000623557 2502 ntBASIC22.18■■□□□ 1.14
NINLQ9Y2I6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NINLQ9Y2I6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms