Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 PCDH8P1-201ENST00000428983 2773 ntBASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AC006277.1-201ENST00000624348 1610 ntBASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 RNA5SP421-201ENST00000516864 134 ntBASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AP002490.2-201ENST00000524791 560 ntBASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AC005412.3-201ENST00000580309 715 ntBASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AJ011932.1-201ENST00000621707 465 ntBASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FNDC3AQ9Y2H6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 AC007326.2-201ENST00000624224 7579 ntBASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 PMS2P4-201ENST00000412466 1052 ntBASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 AC140658.5-201ENST00000438532 169 ntBASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 AL592309.1-201ENST00000443127 649 ntBASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 FAM86C2P-203ENST00000528684 1004 ntBASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 AC012569.1-201ENST00000591191 1524 ntBASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FNDC3AQ9Y2H6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FNDC3AQ9Y2H6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms