Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 IRF5-214ENST00000613821 595 ntTSL 5 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 AC004706.3-202ENST00000621574 984 ntBASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
HHLA3Q9XRX5 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 INIP-202ENST00000374236 874 ntTSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 AC025062.2-201ENST00000605477 670 ntBASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 AC107918.4-202ENST00000641623 219 ntBASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 TUBB8P12-201ENST00000308911 1335 ntBASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 TUBB7P-202ENST00000428444 1305 ntBASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 TUBB8P7-204ENST00000567960 1332 ntBASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HHLA3Q9XRX5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 AC010491.1-201ENST00000563101 2797 ntBASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 RPS2P1-201ENST00000434010 821 ntBASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 TPM4P1-201ENST00000436100 807 ntBASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.04□□□□□ -0.48
HHLA3Q9XRX5 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms