Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 MAGEA7P-201ENST00000436482 942 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AF274858.1-201ENST00000406288 372 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 TROAP-210ENST00000549534 839 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC061975.2-201ENST00000581722 295 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC080013.5-201ENST00000607044 679 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 MIR6893-201ENST00000613458 69 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 GABARAPL3-202ENST00000624044 1851 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 NME4-203ENST00000397722 1232 ntTSL 2 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 NDUFAB1P1-201ENST00000404262 460 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 RPL13P2-201ENST00000440687 659 ntBASIC6.52□□□□□ -1.37
MACF1Q9UPN3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MACF1Q9UPN3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AL157791.1-201ENST00000553667 1699 ntBASIC6.51□□□□□ -1.37
MACF1Q9UPN3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC098657.1-201ENST00000416270 1135 ntBASIC6.51□□□□□ -1.37
MACF1Q9UPN3 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC103810.10-201ENST00000606504 343 ntBASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 KRT17P5-201ENST00000332088 839 ntBASIC6.51□□□□□ -1.37
MACF1Q9UPN3 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 REXO1L11P-201ENST00000620964 1927 ntBASIC6.51□□□□□ -1.37
MACF1Q9UPN3 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 USP40-206ENST00000443711 628 ntTSL 2 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC004837.1-201ENST00000446267 564 ntBASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC6.51□□□□□ -1.37
MACF1Q9UPN3 AC004899.1-201ENST00000424687 1714 ntBASIC6.51□□□□□ -1.37
MACF1Q9UPN3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms