Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.03■□□□□ -0
CLN6Q9NWW5 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.03■□□□□ -0
CLN6Q9NWW5 AL590787.1-201ENST00000568856 1315 ntBASIC15.03■□□□□ -0
CLN6Q9NWW5 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.03■□□□□ -0
CLN6Q9NWW5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.03■□□□□ -0
CLN6Q9NWW5 RCN1P2-201ENST00000398357 915 ntBASIC15.03■□□□□ -0
CLN6Q9NWW5 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.03■□□□□ -0
CLN6Q9NWW5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLN6Q9NWW5 DRAXINP1-201ENST00000437611 948 ntBASIC15.03■□□□□ -0
CLN6Q9NWW5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLN6Q9NWW5 BNIP3P18-201ENST00000593976 575 ntBASIC15.03■□□□□ -0
CLN6Q9NWW5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.03■□□□□ -0
CLN6Q9NWW5 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.03■□□□□ -0
CLN6Q9NWW5 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 MYO15B-237ENST00000642007 4893 ntBASIC15.03■□□□□ -0
CLN6Q9NWW5 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 GPAA1P2-202ENST00000606848 1787 ntBASIC15.03■□□□□ -0
CLN6Q9NWW5 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.03■□□□□ -0
CLN6Q9NWW5 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.03■□□□□ -0
CLN6Q9NWW5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.03■□□□□ -0
CLN6Q9NWW5 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLN6Q9NWW5 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.03■□□□□ -0
CLN6Q9NWW5 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.02■□□□□ -0
CLN6Q9NWW5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLN6Q9NWW5 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.02■□□□□ -0
CLN6Q9NWW5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.02■□□□□ -0
CLN6Q9NWW5 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLN6Q9NWW5 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.02■□□□□ -0
CLN6Q9NWW5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 SIGLEC16-201ENST00000599858 1437 ntBASIC15.02■□□□□ -0
CLN6Q9NWW5 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 PPT1-215ENST00000641471 2368 ntBASIC15.02■□□□□ -0
CLN6Q9NWW5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CLN6Q9NWW5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.02■□□□□ -0
CLN6Q9NWW5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CLN6Q9NWW5 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.02■□□□□ -0
CLN6Q9NWW5 KRT17P6-201ENST00000453795 1220 ntBASIC15.02■□□□□ -0
CLN6Q9NWW5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.02■□□□□ -0
CLN6Q9NWW5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.02■□□□□ -0
CLN6Q9NWW5 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLN6Q9NWW5 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.02■□□□□ -0
CLN6Q9NWW5 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.02■□□□□ -0
CLN6Q9NWW5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.02■□□□□ -0
CLN6Q9NWW5 RN7SL850P-201ENST00000579959 291 ntBASIC15.02■□□□□ -0
CLN6Q9NWW5 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.02■□□□□ -0
CLN6Q9NWW5 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 NSUN5P1-202ENST00000421140 1535 ntBASIC15.02□□□□□ -0.01
CLN6Q9NWW5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.02□□□□□ -0.01
CLN6Q9NWW5 NSUN5P2-203ENST00000457352 1529 ntBASIC15.02□□□□□ -0.01
CLN6Q9NWW5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLN6Q9NWW5 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 AC005332.1-201ENST00000577698 1310 ntBASIC15.01□□□□□ -0.01
CLN6Q9NWW5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.01□□□□□ -0.01
CLN6Q9NWW5 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms