Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 MIR3652-201ENST00000579335 131 ntBASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 MIR3180-1-201ENST00000580374 94 ntBASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 MIR3180-3-201ENST00000584616 94 ntBASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 AF228730.7-201ENST00000641842 219 ntBASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 AL122018.1-201ENST00000446607 2310 ntBASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 MTHFR-217ENST00000641820 1569 ntBASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 AC106795.1-205ENST00000512851 1056 ntBASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHB16Q9NRJ7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms