Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 U82695.1-201ENST00000635752 1889 ntBASIC15.52■□□□□ 0.07
NEUROD4Q9HD90 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NEUROD4Q9HD90 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.52■□□□□ 0.07
NEUROD4Q9HD90 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NEUROD4Q9HD90 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 IGLL3P-201ENST00000412472 434 ntBASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 AC109635.5-201ENST00000533593 962 ntBASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 AC096734.2-201ENST00000562054 433 ntBASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
NEUROD4Q9HD90 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 HCG4B-203ENST00000450128 991 ntBASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 IGHV3-22-201ENST00000520721 359 ntBASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NEUROD4Q9HD90 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AL592424.1-201ENST00000563624 1536 ntBASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AL603832.2-201ENST00000566195 2125 ntBASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 AC024909.3-201ENST00000611513 2257 ntBASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 MIR648-201ENST00000385046 94 ntBASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.49■□□□□ 0.07
NEUROD4Q9HD90 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms