Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 AGGF1P2-201ENST00000426656 2106 ntBASIC14.38□□□□□ -0.11
CDH20Q9HBT6 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH20Q9HBT6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 AC016027.1-202ENST00000607927 1699 ntBASIC14.37□□□□□ -0.11
CDH20Q9HBT6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 GPX1P2-201ENST00000429271 606 ntBASIC14.37□□□□□ -0.11
CDH20Q9HBT6 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 AC092902.6-201ENST00000641783 218 ntBASIC14.37□□□□□ -0.11
CDH20Q9HBT6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH20Q9HBT6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 GGT3P-204ENST00000453783 1664 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 AL355306.1-201ENST00000415580 579 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SPDYE11-202ENST00000450699 704 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 RN7SL589P-201ENST00000481268 310 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SPDYE9P-201ENST00000570642 692 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.36□□□□□ -0.11
CDH20Q9HBT6 AC099522.2-201ENST00000607001 744 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SPDYE10P-202ENST00000612005 668 ntBASIC14.36□□□□□ -0.11
CDH20Q9HBT6 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms