Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 AC036164.1-201ENST00000570544 333 ntBASIC16.62■□□□□ 0.25
NOTCH4Q99466 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH4Q99466 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH4Q99466 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH4Q99466 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH4Q99466 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH4Q99466 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NOTCH4Q99466 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.62■□□□□ 0.25
NOTCH4Q99466 RPL13P2-201ENST00000440687 659 ntBASIC16.62■□□□□ 0.25
NOTCH4Q99466 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 AC124283.3-201ENST00000570869 594 ntBASIC16.62■□□□□ 0.25
NOTCH4Q99466 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC16.62■□□□□ 0.25
NOTCH4Q99466 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 REXO1L8P-201ENST00000604378 1897 ntBASIC16.61■□□□□ 0.25
NOTCH4Q99466 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 POU5F1P6-201ENST00000466990 990 ntBASIC16.61■□□□□ 0.25
NOTCH4Q99466 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 AC092658.1-201ENST00000505836 891 ntBASIC16.61■□□□□ 0.25
NOTCH4Q99466 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 MIR6799-201ENST00000620297 69 ntBASIC16.61■□□□□ 0.25
NOTCH4Q99466 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 REXO1L6P-201ENST00000603433 1515 ntBASIC16.61■□□□□ 0.25
NOTCH4Q99466 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.61■□□□□ 0.25
NOTCH4Q99466 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NOTCH4Q99466 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 MIR4538-201ENST00000581377 78 ntBASIC16.6■□□□□ 0.25
NOTCH4Q99466 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 CSF2RBP1-201ENST00000447905 391 ntBASIC16.6■□□□□ 0.25
NOTCH4Q99466 HNRNPUP1-201ENST00000554987 333 ntBASIC16.6■□□□□ 0.25
NOTCH4Q99466 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.6■□□□□ 0.25
NOTCH4Q99466 KRT8P22-201ENST00000562317 1415 ntBASIC16.6■□□□□ 0.25
NOTCH4Q99466 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NOTCH4Q99466 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.59■□□□□ 0.25
NOTCH4Q99466 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NOTCH4Q99466 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms