Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CASKIN1Q8WXD9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 AC124283.3-201ENST00000570869 594 ntBASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 AC010319.3-201ENST00000597028 470 ntBASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 AC097359.3-201ENST00000603982 1210 ntBASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC25.04■■□□□ 1.6
CASKIN1Q8WXD9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 AC134407.2-201ENST00000625089 1978 ntBASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 HAUS4P1-201ENST00000406739 1145 ntBASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 MIR5189-201ENST00000577370 114 ntBASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 AC015936.2-201ENST00000593177 259 ntBASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 MIR6805-201ENST00000615055 62 ntBASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CASKIN1Q8WXD9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 RAB43P1-201ENST00000561790 589 ntBASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CASKIN1Q8WXD9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC25.01■■□□□ 1.6
CASKIN1Q8WXD9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 ANKRD19P-201ENST00000338192 862 ntBASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 AC022210.1-201ENST00000449856 793 ntBASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 AL512343.1-201ENST00000605837 169 ntBASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC25.01■■□□□ 1.59
CASKIN1Q8WXD9 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 1771.7 ms