Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.23■□□□□ 0.67
STAG1Q8WVM7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 PCDHB19P-201ENST00000570871 2371 ntBASIC19.22■□□□□ 0.67
STAG1Q8WVM7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 AC011467.4-201ENST00000594891 528 ntBASIC19.22■□□□□ 0.67
STAG1Q8WVM7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
STAG1Q8WVM7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 KLF2P3-201ENST00000451977 1087 ntBASIC19.21■□□□□ 0.67
STAG1Q8WVM7 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 SPCS2P1-201ENST00000561636 679 ntBASIC19.21■□□□□ 0.67
STAG1Q8WVM7 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 AL390955.2-201ENST00000603032 514 ntBASIC19.21■□□□□ 0.67
STAG1Q8WVM7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
STAG1Q8WVM7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.2■□□□□ 0.66
STAG1Q8WVM7 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms