Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 CEND1P1-201ENST00000451006 455 ntBASIC16.66■□□□□ 0.26
PTCD2Q8WV60 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 AL031055.1-201ENST00000606362 631 ntBASIC16.66■□□□□ 0.26
PTCD2Q8WV60 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 ELL2P1-201ENST00000413990 1906 ntBASIC16.66■□□□□ 0.26
PTCD2Q8WV60 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 AL596087.1-201ENST00000400979 1969 ntBASIC16.66■□□□□ 0.26
PTCD2Q8WV60 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PTCD2Q8WV60 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 MAPK10-223ENST00000511167 1265 ntTSL 5 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTCD2Q8WV60 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PTCD2Q8WV60 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 MKNK2P1-201ENST00000437526 628 ntBASIC16.64■□□□□ 0.25
PTCD2Q8WV60 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC16.64■□□□□ 0.25
PTCD2Q8WV60 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PTCD2Q8WV60 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms