Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NPAS3Q8IXF0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 MIR1909-201ENST00000411312 80 ntBASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 AC112492.5-201ENST00000421897 457 ntBASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 RN7SL837P-201ENST00000463010 287 ntBASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 AC106886.1-201ENST00000568660 600 ntBASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NPAS3Q8IXF0 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 ELK1P1-201ENST00000485699 580 ntBASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 KRT17P8-201ENST00000540749 863 ntBASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 AC123567.1-201ENST00000548294 1261 ntBASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 CTBP2P3-201ENST00000585629 1255 ntBASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NPAS3Q8IXF0 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms