Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.33■□□□□ 0.84
UBE3BQ7Z3V4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 AL365330.1-201ENST00000607459 531 ntBASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 AC009053.2-201ENST00000563701 2365 ntBASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 AL136982.4-201ENST00000437689 1740 ntBASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBE3BQ7Z3V4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 AL139010.1-201ENST00000454878 894 ntBASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 AC010336.2-201ENST00000564226 506 ntBASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 AC004840.1-201ENST00000636359 365 ntBASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 KRT8P12-202ENST00000472924 1397 ntBASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBE3BQ7Z3V4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 ME2P1-201ENST00000426028 1970 ntBASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 LTB4R2-202ENST00000528054 3092 ntBASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 SPDYE17-201ENST00000412399 783 ntBASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 AC015922.1-201ENST00000421102 1152 ntBASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 AL592424.1-201ENST00000563624 1536 ntBASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 REXO1L8P-201ENST00000604378 1897 ntBASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 NKILA-202ENST00000614771 2598 ntBASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBE3BQ7Z3V4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms