Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 FAM86LP-201ENST00000478302 853 ntBASIC20.41■□□□□ 0.86
SMIM5Q71RC9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC20.41■□□□□ 0.86
SMIM5Q71RC9 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 FAM21FP-201ENST00000426241 1131 ntBASIC20.4■□□□□ 0.86
SMIM5Q71RC9 AL442647.2-201ENST00000429864 857 ntBASIC20.4■□□□□ 0.86
SMIM5Q71RC9 AL162726.2-201ENST00000438986 1017 ntBASIC20.4■□□□□ 0.86
SMIM5Q71RC9 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 FO681548.1-201ENST00000455617 1132 ntBASIC20.4■□□□□ 0.86
SMIM5Q71RC9 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 AC106760.1-201ENST00000508690 800 ntBASIC20.4■□□□□ 0.86
SMIM5Q71RC9 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 RHOQP1-201ENST00000555758 579 ntBASIC20.4■□□□□ 0.86
SMIM5Q71RC9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC20.4■□□□□ 0.86
SMIM5Q71RC9 APRT-204ENST00000563655 709 ntTSL 5 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 AL139011.1-202ENST00000642063 584 ntBASIC20.4■□□□□ 0.86
SMIM5Q71RC9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SMIM5Q71RC9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SMIM5Q71RC9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 FXR1-221ENST00000491674 365 ntTSL 2 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 AC068587.3-201ENST00000526613 355 ntBASIC20.39■□□□□ 0.85
SMIM5Q71RC9 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 AC036164.1-201ENST00000570544 333 ntBASIC20.39■□□□□ 0.85
SMIM5Q71RC9 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 CLUHP6-201ENST00000580789 941 ntBASIC20.39■□□□□ 0.85
SMIM5Q71RC9 BRI3BPP1-201ENST00000594224 787 ntBASIC20.39■□□□□ 0.85
SMIM5Q71RC9 SPIB-207ENST00000597855 564 ntTSL 4 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 AL021578.1-201ENST00000613646 709 ntBASIC20.39■□□□□ 0.85
SMIM5Q71RC9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
SMIM5Q71RC9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 AC124283.3-201ENST00000570869 594 ntBASIC20.38■□□□□ 0.85
SMIM5Q71RC9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 ATF5-205ENST00000600336 682 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.38■□□□□ 0.85
SMIM5Q71RC9 AC139713.2-201ENST00000641328 2723 ntBASIC20.38■□□□□ 0.85
SMIM5Q71RC9 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms